COMRAD - Cattle Comparative Radiation Hybrid Map

Marker Table for Chromosome 15

Framework
markers
Marker IDPrimer 1Primer 2Retention
Frequency
Gene Names
F2 ABS011 AAAACGGCAATTCAGGGAG GAAAAACACACCACCTCTTCC 0.266   
F2 BB1539 CGGCAATAAAGGCTGTCCT CATCCAGGCAACCCTTGGA 0.223   
 BB712 CATGTAGGCATGGGCTTTG TCTACCATCTGAGCTACCAGGAA 0.283   
F3 BL1095 TCCCTCTACCATATATTTCCCC CATTAGCATGGAAAAACCTCTG 0.245   
 BM4439 TGTCAAATTATGAAACAAGGAAGC GAATTCCACGTCACAGAGTCG 0.242   
 BM848 TGGTTGGAAGGAAAACTTGG CCCTCTGCTCCTCAAGACAC 0.255   
F1 BMS1004 TTAAAAGTCAGAAAGGGAAGCC CTCGACCTCACATACTCAAAGC 0.213   
F2 BMS1782 AGCTTTTGTGTGCTTCACATG TACTCCTTTGCCTTCCTCTCC 0.191   
 BMS2076 AGCACCTGTACCATCTGTTCC TCCATAGGCTCACAAAGAGTTG 0.245   
F1 BMS2533 TGAAGTAAGTAAGCACACAAGCA TTGATCATCTTTAGGTCCATCC 0.287   
 BMS2684 CCAAGGTCATTGTTGCAGC TGGGGATTTGCTTCTCAGTC 0.234   
 BMS2812 TCCAGGTTAGCTGACATAATCC ATTGTTCCATTGCATGTTCC 0.202   
 BMS429 TACATTAACCCCAAAATTAAATGC CCCTTGATTTCTCTCATGAGTATT 0.255   
F3 BMS540 TTTCCCATGTTATTCCATGAA ACCAGGCTCTTCGTCCTC 0.181   
 BMS686 TTCCTTACATCATTCACCACTG TGGGGATCACAAAGAATCAG 0.245   
F3 BMS812 TGGACAGGACTGAGTATGCA AGGTATCCAACTAACACAGCCA 0.149   
 BMS820 CCACTACTTGCCTCAGGGAG ACAGGACTCTCAAGCATCAGC 0.245   
 BR3510 GCTGGTGGGTTGTTTACCAC ACCCCGTGGACTGTAGTCTG 0.277   
 BY1520 CACAAATATCCTTGTGTTTTTGGA CAACAGGAGAAATAAAGAGTG 0.183   
F1 DIK102 CCTTCTCCCTTTGTCTGTAC TAGGAAAAACACCAGCAAGAC 0.202   
 DIK36 TCTTCCTAGCGTTTCATCAC TTCCTGGTAAGTCTTTGGGT 0.191   
 DRD2* TGCTCAGTTATCACAGCAGTGGTC TGCGAAAAGGCGAGAGGAAGAG 0.223 dopamine receptor D2 
 FSHBMS* TATAGACTTAGTGGCATGATATT TAGAATAGGTTTTTTTGTAGCAC 0.16 follicule stimulating hormone, beta polypeptide 
F2 HBBMS* GCAGCAATCAGTACAAAAGAGG GCAACTGGCAAAATTTCATTC 0.202 hemoglobin, beta [beta globin] 
 HEL1 CAACAGCTATTTAACAAGGA AGGCTACAGTCCATGGGATT 0.202   
 IDVGA10 GGCTAAGACCAGCACCTTGAATA GGGACCTTGAGGAGGAGACAG 0.223   
 IDVGA23 TCTGCCCCAACCTGCTGTAG GCCGCAATCAGGAGTTTGAC 0.245   
 IDVGA28 TCACCTTCATCTGCCTTCACTGC CGTCAAAGTGATGTGCGTATGC 0.16   
 IDVGA32 CAGGTGTTGGAGGATGAGAAAGG CAGTCTATGGCACAGTCTTGGTA 0.17   
F2 IDVGA60 GTGTGTGTGTGTGTCCAGTG CCCGAACCTGTGCCCGAAAA 0.16   
F3 ILSTS27 GGTGTGTTGGTTAAGACTGG GAATCATAGACCTGACTTCC 0.138   
F3 ILSTS61 AAATTATAGGGGCCATACGG TGGCCTACCCTACCATTTCC 0.128   
F2 INRA224 AGAGGCAGTCCAGTGAAAGG GCCAGTTTTGTGTACATTATGG 0.245   
 INRA46 GAGCTCATGTGTTTACATGG AGTCTCTGGAACTTCTCCTAC 0.255   
 INRA50 ACAGGCTACAGTCCATGGGGTT TATAGAACAGAAAAATGACTACACG 0.202   
 IOBT395 ACAACAGGAAAGCTCTGCCA ACATGTAGCTGTTGATACAGAT 0.223   
 JAB1 CAGCCATTAAGGGCTGGGATTCC GATTTCTGGAGGAGGCTCACAGCAG 0.234   
 JAB8 CACGTCACCCGCTTTCTCTTG GGTGAGTGTAACACCTGTGTGCG 0.245   
F1 MGTG13B GAGTGACTCACTTTCACCTATAATA CTTAGCATAACGTCCTCTAGATTCA 0.277   
 NCAM1MS* AAGTGACACAACAGCTTCTCC AAGGAGATTTTATGTTGATCTGCT 0.255 cell adhesion molecule, neural 
 NOR04 ACACAGATGTGGTTTGGGGA ACTCTCTGCTGTAAACTGTATT 0.213   
F3 RM4 CAGCAAAATATCAGCAAACCT CCACCTGGGAAGGCCTTTA 0.277   
 X57033 GTAAACACAGTTCCCTGGAGAG ATGCCAACTTTTCCCATCAC 0.149   
  • Back to the chromosome panel
  • Data from http://www.projects.roslin.ac.uk/comrad/introduction.html
  • Contact: Dr John Williams
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