COMRAD - Cattle Comparative Radiation Hybrid Map

Marker Table for Chromosome 21

Framework
markers
Marker IDPrimer 1Primer 2Retention
Frequency
Gene Names
 AFZ TTGGACGACAAAACTCACGG GTGGCTGGACTGGTCTGGTT 0.326   
F1 AGLA233 TGCAAACATCCACGTAGCATAAATA GCATGAACAGCCAATAGTGTCATC 0.228   
F1 BM103 CTAGCTGCTGGCTACTTGGG GGCTGCTCTGGGCTATTG 0.226   
 BM3413 TCCCTGGTAACCAATGAATTC CAATGGATTTGACCCTCCC 0.255   
 BM8115 AATCAACATCCAGATTTCTTTTTG CCACCCCAAAGACCTTTCTA 0.344   
 BM846 GACCACTGGACCACCAGG CTGGTAAAAAGCAATGATGCC 0.181   
 BMC4228 CAGAGGGATTGTTCTGACTTCA AGCAGCACTAAGGTTCCAGC 0.258   
F1 BMS1117 TGTGTGCTCTCTCACACATGC AACCAAAGCAGGGATCAGG 0.275   
F1 BMS1494 TCTGGAGCTTGCAAAAGACC AATGGATGACTCCTGGATGG 0.233   
 BMS2382 AGCACGGAGTCGTTGTCTG CCATCTGGACAGAACGTTACC 0.308   
 BMS2557 TTGCCTCATGGAACAATGTG AAGAGTCGGACACAACTGAGC 0.237   
 BMS2815 TGATATTCAAACTCAATGAACCC CTTGCATATGCTCATCATTATCA 0.227   
F3 BMS670 ACTGCCATTCTGGTTTCTGC TGAGCAACTAAACAACGACAGC 0.301   
F2 BMS868 TCATCCAACCATCTCATCCT ACATGGAAACGAACCTACATTC 0.194   
F1 BP33 AGGCCTCTGAATTCCTCTCC AACCAGCAGTCTTGCTCTCTC 0.247   
 CSSM018 ATTCCCTCTAGAAAAGCAGGCTCC CTCGTGGTGTAGAGAAGACGCCTT 0.287   
F2 DIK64 CATCATTCTAATGGTAAGGAG AAAGGCCACTTATGAATCCAT 0.202   
 ETH131 GTGGACTATAGACCATAAGGTC GCTGTGATGGTCTACGAATGA 0.213   
F1 HAUT28 GCTTGTTCCTATCACCCATTTA GAAGGCTTGGAAAATGTAATC 0.242   
F1 HEL5 GCAGGATCACTTGTTAGGGA AGACGTTAGTGTACATTAAC 0.245   
 IDVGA39 ACGGTGGGAACATCTTGTCACTA CCAGTATTCTTCCTGCGAAAAATC 0.234   
F1 IDVGA45 GTGGTGGCAAAGAGTCAGA AACAGCCCTGATTTCCATA 0.223   
 ILSTS016 TACTGTATAGGGGGTGCACG AATCTCTTTCCAACTCTCCC 0.17   
F1 ILSTS054 GAGGATCTTGATTTTGATGTCC AGGGCCACTATGGTACTTCC 0.202   
F2 ILSTS092 GAGAAACTTTGGGCTGCTGC ATGGATTGCTTCTGTGGACC 0.191   
 ILSTS095 GAAAGATGTTGCTAGTGGGG ATTCTCCTGTGAACCTCTCC 0.266   
 ILSTS103 CCAGTCTGCCAAAATCTATCG TATCAGGCGTAGTAAACAGC 0.234   
 ILSTS52 CTGTCCTTTAAGAACAAACC TGCAACTTAGGCTATTGACG 0.287   
F1 INRA060 TTCCATATAGCATTTAGAATCAGC AGACACTCCCAAATAAAATCCC 0.176   
F1 INRA103 TTGTCCAGCCCAGCATTTAGC GGAGAAGACTTATGGGAGC 0.25   
 RM151 CCCAGAGGTGACAACATTTCCAG GATCCACCAAAAACCAGCTGGA 0.245   
F3 TGLA122 CCCTCCTCCAGGTAAATCAGC AATCACATGGCAAATAAGTACATAC 0.207   
F3 TGLA337 TTTGTTAAGGATAGTAGGCTACT GCTCTTCCCTTGGTTTCCTTG 0.191   
 URB22 GCACTGAATGTTCCCTGTACTA TAGGTGGTAATGAATCTCCTGC 0.204   
 UWCA4 CAGCTTGAAATGAGTATGTCACC CAACAAGAAAGCAGAGACTCC 0.266   
Markers below are Not included in the map
 BMC5221 AGCAAGGAGAACAGGCATTC CTTCTTTGGCAGCACAGTTTC 0.194   
  • Back to the chromosome panel
  • Data from http://www.projects.roslin.ac.uk/comrad/introduction.html
  • Contact: Dr John Williams
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