Cattle QTL Database

Release 55
(Dec 23, 2024)

Curator: Cari Park
Curated: 2015-03-02
Updated: 2024-04-23

Publication # 25151887 Details

Authors:	Sahana G, Guldbrandtsen B, Thomsen B, Holm L-E, Panitz F, Brøndum R F, Bendixen C, Lund M S (Contact: Goutam.Sahana@agrsci.dk)
Affiliation:	Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University, 8830 Tjele, Denmark
Title:	Genome-wide association study using high-density single nucleotide polymorphism arrays and whole-genome sequences for clinical mastitis traits in dairy cattle
Journal:	Journal Of Dairy Science, 97(11): 7258-75 (2014)	DOI: S0022-0302(14)00572-4
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Clinical mastitis reported for chromosome(s): Chr.5: Asso:36491, Asso:36492, Asso:36493, Asso:36494, Asso:36495. Chr.6: Asso:36496, Asso:36497, Asso:36498, Asso:36499. Chr.13: Asso:36504, Asso:36505, Asso:36531. Chr.16: Asso:36507, Asso:36508, Asso:36509, Asso:36510, Asso:36532, Asso:36543. Chr.19: Asso:36514, Asso:36515, Asso:36516, Asso:36517, Asso:36530, Asso:36544. Chr.20: Asso:36522, Asso:36523, Asso:36524, Asso:36525, Asso:36526, Asso:36533. QTL for Somatic cell count reported for chromosome(s): Chr.6: Asso:36500, Asso:36501, Asso:36502, Asso:36503. Chr.13: Asso:36506. Chr.16: Asso:36511, Asso:36512, Asso:36513. Chr.19: Asso:36518, Asso:36519, Asso:36520, Asso:36521. Chr.20: Asso:36527, Asso:36528, Asso:36529. QTL for Milk fat yield reported for chromosome(s): Chr.5: Asso:36534. Chr.13: Asso:36539. Chr.20: Asso:36540. QTL for Milk protein yield reported for chromosome(s): Chr.5: Asso:36535. Chr.6: Asso:36537. Chr.20: Asso:36541. QTL for Milk yield reported for chromosome(s): Chr.5: Asso:36536. Chr.6: Asso:36538. Chr.20: Asso:36542. QTL/association Reported by chromosomes: Chr.5 (8), Chr.6 (10), Chr.13 (5), Chr.16 (9), Chr.19 (10), Chr.20 (12). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Sahana G, Guldbrandtsen B, Thomsen B, Holm L-E, Panitz F, Brøndum R F, Bendixen C, Lund M S (2014). Genome-wide association study using high-density single nucleotide polymorphism arrays and whole-genome sequences for clinical mastitis traits in dairy cattle. Journal of dairy science, 97(11): 7258-75; Curated into QTLdb on 2015-03-02. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=KrQz2L2NoH

Sahana G, Guldbrandtsen B, Thomsen B, Holm L-E, Panitz F, Brøndum R F, Bendixen C, Lund M S (2014). Genome-wide association study using high-density single nucleotide polymorphism arrays and whole-genome sequences for clinical mastitis traits in dairy cattle. Journal of dairy science, 97(11): 7258-75; DOI: https://dx.doi.org/S0022-0302(14)00572-4

Publication # 25151887 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: