Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 10012 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Reported name: Subcutaneous fat Product Trait Ontology: n/a
Symbol: SUBFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:15
QTL Peak Location:52 (cM)
QTL Span:42.27-42.47 (cM)
32.8-32.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:QTL
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
F_Stat11.30
VARIANCE3.1
P_values<0.01
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #10012
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  •  QTL Experiment in Brief
    Animals:Animals were from a paternal half-sib family of Japanese Black Cattle.
     Breeds associated:
    Design:A genome screen was performed using markers spaced at about 10-cM intervals on the autosomes. Animals were analyzed for carcass and meat quality traits.
    Analysis:Interval mapping using a linear regression model was performed.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:Yokouchi, K; Mizoguchi, Y; Watanabe, T; Iwamoto, E; Sugimoto, Y; Takasuga, A
    Affiliation:Shirakawa Institute of Animal Genetics, Odakura, Nishigo, Fukushima 9618061, Japan; takasuga@siag.or.jp
    Title:Identification of a 3.7-Mb region for a marbling QTL on bovine chromosome 4 by identical-by-descent and association analysis.
    Journal:Animal genetics, 2009, 40(6): 945-51
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #19781039
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  • Cite this Data:

    Animal QTLdb: QTL10012 was published in 2009, and was curated into QTLdb on 2009-12-10. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:10012

     

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