| QTL Map Information |
|---|
| Chromosome: | 23 |
| QTL Peak Location: | 5.93 (cM) |
| QTL Span: | 5.93-5.93 (cM)
4.2-4.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110601061 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.188 | | P_values | 0.03 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | COL21A1 (collagen type XXI alpha 1 ) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein-Friesian cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for susceptibility to bovine leukemia virus. A total of 34,297 SNPs were used for analysis. |
| Analysis: | Mixed models were used. |
| Software: | SVS software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Brym P, Bojarojć-Nosowicz B, Oleński K, Hering D M, Ruść A, Kaczmarczyk E, Kamiński S |
| Affiliation: | Department of Animal Genetics, University of Warmia and Mazury in Olsztyn, Oczapowskiego 5, 10-719 Olsztyn, Poland |
| Title: | Genome-wide association study for host response to bovine leukemia virus in Holstein cows |
| Journal: | Veterinary immunology and immunopathology, 2016, 175: 24-35 |
| Links: |
PubMed | Abstract | List all data
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