| QTL Map Information |
|---|
| Chromosome: | 22 |
| QTL Peak Location: | 50.24 (cM) |
| QTL Span: | 50.24-50.24 (cM)
40.6-40.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41643857 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.0018 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for 54,001 SNPs using the BovineSNP50 chip and analyzed for IVF fertility traits. |
| Analysis: | Association analysis was first carried out using selective DNA pooling and a Z-score test. Significant SNPs were further evaluated using individual genotypes and a generalized linear mixed model. |
| Software: | SAS, R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Huang W, Kirkpatrick BW, Rosa GJ, Khatib H |
| Affiliation: | Department of Dairy Science, University of Wisconsin-Madison, Madison, WI 53706, USA |
| Title: | A genome-wide association study using selective DNA pooling identifies candidate markers for fertility in Holstein cattle |
| Journal: | Animal Genetics, 2010, 41(6):570-8 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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