| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 2.01 (cM) |
| QTL Span: | 1.54-2.49 (cM)
1.6-2.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs109407215 |
| Peak: | |
| Lower, "Significant": | rs135185551 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 47.18% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Nelore cattle in Brazil. |
| Breeds associated:
|
| Design: | Animals were genotyped using either the Illumina BovineHD BeadChip or CLARIFIDE Nelore 2.0 (with data imputed to HD) and analyzed for horn phenotype (horned or polled). A total of 461,865 SNPs were used for analysis. |
| Analysis: | A weighted single-step genome-wide association study was performed using a threshold model. |
| Software: | FImpute, THRGIBBS1F90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Stafuzza NB, Silva RMO, Peripolli E, Bezerra LAF,Lôbo RB, Magnabosco CU, Di Croce FA, Osterstock JB, Munari DP, Lourenco DAL, Baldi F |
| Affiliation: | Departamento de Zootecnia, Faculdade de Ciencias Agrarias e Veterinarias (FCAV), Universidade Estadual Paulista Julio de Mesquita Filho (UNESP), Jaboticabal, Sao Paulo, Brazil |
| Title: | Genome-wide association study provides insights into genes related with horn development in Nelore beef cattle |
| Journal: | PloS one, 2018, 13(8): e0202978 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | polled |
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