| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | 117.35 (cM) |
| QTL Span: | 117.34-117.36 (cM)
118.0-118.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs43373652 |
| Peak: | |
| Lower, "Significant": | rs110139967 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 1.66% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Nelore cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the GeneSeek SNP Beadchips Bovine GGP-HDi assay (imputed to HD) or Illumina BovineHD BeadChip and analyzed for carcass traits. A total of 463,995 SNPs were used for analysis. |
| Analysis: | For ssGWAS, a modification of BLUP was used. |
| Software: | REMLF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Carvalho ME, Baldi FS, Alexandre PA, Santana MHA, Ventura RV, Bueno RS, Bonin MN, Rezende FM, Coutinho LL, Eler JP, Ferraz JBS |
| Affiliation: | Departamento de Medicina Veterinária, Faculdade de Zootecnia e Engenharia de Alimentos, Universidade de São Paulo, Pirassununga, SP, Brasil |
| Title: | Genomic regions and genes associated with carcass quality in Nelore cattle |
| Journal: | Genet Mol Res, 2019, 18(1): gmr18226 |
| Links: |
No PubMed entry | Abstract | List all data
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