Release 56
(Apr 24, 2025)

QTL 20705 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Reported name: Subcutaneous fat Product Trait Ontology: n/a
Symbol: SUBFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:49.91 (cM)
QTL Span:40.78-56.35 (cM)
29.5-41.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs109546980
Peak:
Lower, "Significant":rs41566855
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.01
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Canchim cattle.
     Breeds associated:
    Design:Animals were genotyped using the BovineSNP50 BeadChip and analyzed for backfat thickness.
    Analysis:A restricted maximum likelihood method using an animal model was employed.
    Software:WEKA, ASREML
    Notes: 
    Links:Edit

     Reference
    Authors:Veneroni-Gouveia G, Meirelles S L, Grossi D A, Santiago A C, Sonstegard T S, Yamagishi M E B, Matukumalli L K, Coutinho L L, Alencar M M, Oliveira H N, Regitano L C A,
    Affiliation:Graduate Program on Genetics and Evolution, São Carlos Federal University, São Carlos, SP 13565-905, Brazil.
    Title:Whole-genome analysis for backfat thickness in a tropically adapted, composite cattle breed from Brazil.
    Journal:Animal genetics, 2012, 43 (5): 518-24
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #22497247
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  • Cite this Data:

    Animal QTLdb: QTL20705 was published in 2012, and was curated into QTLdb on 2013-05-07. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:20705

     

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