| QTL Map Information |
|---|
| Chromosome: | 22 |
| QTL Peak Location: | 82.72 (cM) |
| QTL Span: | 82.72-82.72 (cM)
52.3-52.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41603523 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 3.2 | | P_values | 5.5E-4 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | LOC100849619 (tyrosine-protein phosphatase non-receptor type 23-like) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Dutch Holstein Friesian cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using the 50K Infinium SNP chip and analyzed for milk vitamin B-12 content. The final marker set included 49994 markers. |
| Analysis: | An animal model was used. |
| Software: | ASReml |
| Notes: | A number of significant data points were not entered due to lack of SNP ID. |
| Links: | Edit |
| Reference |
|---|
| Authors: | Rutten Marc J M, Bouwman Aniek C, Sprong R Corinne, van Arendonk Johan A M, Visker Marleen H P W |
| Affiliation: | Animal Breeding and Genomics Centre, Wageningen University, Wageningen, The Netherlands |
| Title: | Genetic variation in vitamin B-12 content of bovine milk and its association with SNP along the bovine genome |
| Journal: | PloS one, 2013, 8 (4): e62382 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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