| QTL Map Information |
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| Chromosome: | 5 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
119.1-119.1 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs383059173 |
| Peak: | rs134583661 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
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P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Montbeliarde cows. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50, EuroG10K, or BovineHD BeadChip, with data imputed to whole-genome sequence, and GWAS was performed for milk mineral composition traits. A total of 12,907,802 SNPs were used for analysis. |
| Analysis: | Single-trait association analyses were performed using a mixed linear model. |
| Software: | GCTA, Minimac, FImpute, SAMtools |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sanchez MP, Rocha D, Charles M, Boussaha M, Hozé C, Brochard M, Delacroix-Buchet A, Grosperrin P, Boichard D |
| Affiliation: | Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France |
| Title: | Sequence-based GWAS and post-GWAS analyses reveal a key role of SLC37A1, ANKH, and regulatory regions on bovine milk mineral content |
| Journal: | Scientific reports, 2021, 11(1): 7537 |
| Links: |
PubMed | Abstract | List all data
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