Release 56
(Apr 24, 2025)

QTL 259370 Description:

 Trait Information
Trait name: Longissimus muscle area Vertebrate Trait Ontology: Longissimus thoracis muscle area
Reported name: eye muscle area Product Trait Ontology: n/a
Symbol: LMA Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:n/a
QTL Span:n/a
25.2-25.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs42406053
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:Genome-wise
Threshold significance level:Significant
VARIANCE0.0096%
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Hanwoo cattle.
     Breeds associated:
    Design:GWAS was performed for carcass traits using 3,379,546 SNPs.
    Analysis:Single-SNP associations were evaluated using a linear mixed model that included a polygenic effect.
    Software:Beagle v.5.1, MMAP
    Notes: 
    Links:Edit

     Reference
    Authors:Kim HJ, de Las Heras-Saldana S, Moghaddar N, Lee SH, Lim D, van der Werf JHJ
    Affiliation:School of Environmental & Rural Science, University of New England, Armidale, New South Wales, Australia
    Title:Genome-wide association study for carcass traits in Hanwoo cattle using additional relatives' information of non-genotyped animals
    Journal:Animal Genetics, 2022, 53(6):863-866
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #35993261
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  • Cite this Data:

    Animal QTLdb: QTL259370 was published in 2022, and was curated into QTLdb on 2022-09-08. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:259370

     

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