Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 3506 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Reported name: Subcutaneous fat thickness (EBV) Product Trait Ontology: n/a
Symbol: SUBFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:5.125 (cM)
QTL Span:3.87-4.07 (cM)
3.1-3.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:CSSM066
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
P_values0.0058
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #3506
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  •  QTL Experiment in Brief
    Animals:Animals were from the M1, M3, and TX lines of Beef-booster Inc. and were born in 1998.
     Breeds associated:
    n/a
    Design:Haplotype identification and fine mapping of QTL for backfat EBV on chromosome 14 was carried out using the identical-by-descent haplotype-sharing analysis.
    Analysis:Type-III sums of squares was used in all F-tests. The haplotype effect in SD was estimated by dividing the difference of backfat EBV least squares mean between haplotype classes "1" and "0" by the SD of the trait.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Moore, S S; Li, C; Basarab, J; Snelling, W M; Kneeland, J; Murdoch, B; Hansen, C; Benkel, B;
    Affiliation:
    Title:Fine mapping of quantitative trait loci and assessment of positional candidate genes for backfat on bovine chromosome 14 in a commercial line of Bos taurus.
    Journal:J Anim Sci, 2004, 8 (81): 1919-25
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:EBV
    User inputs on reference #12926773
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  • Cite this Data:

    Animal QTLdb: QTL3506 was published in 2004, and was curated into QTLdb on 2013-03-07. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:3506

     

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