Release 56
(Apr 24, 2025)

QTL 297049 Description:

 Trait Information
Trait name: Offspring number Vertebrate Trait Ontology: Offspring quantity
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: OFSPN Clinical Measurement Ontology: Number of offspring
 QTL Map Information
Chromosome:11
QTL Peak Location:n/a
QTL Span:n/a
58.1-58.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs268285719
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:-
Test base:-
Threshold significance level:Significant
P_values6.87E-7
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #297049
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Youzhou dark goats.
     Breeds associated:
    n/a
    Design:Animals were genotyped using the Illumina GoatSNP54 BeadChip, and GWAS were performed for litter size and coat/skin color traits. A total of 41,180 SNPs were used for analysis.
    Analysis:A linear model was used.
    Software:PLINK 1.07, ADMIXTURE 1.3, ggplot2 in R, Beagle v3.3.2
    Notes: 
    Links:Edit

     Reference
    Authors:Sun X, Niu Q, Jiang J, Wang G, Zhou P, Li J, Chen C, Liu L, Xu L, Ren H
    Affiliation:Chongqing Academy of Animal Sciences, Rongchang 402460, China
    Title:Identifying Candidate Genes for Litter Size and Three Morphological Traits in Youzhou Dark Goats Based on Genome-Wide SNP Markers
    Journal:Genes, 2023, 14(6):1183
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #37372363
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL297049 was published in 2023, and was curated into QTLdb on 2024-06-12. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:297049

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team