| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs661016801 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SUN3 (Sad1 and UNC84 domain containing 3) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were female Dazu Black goats. |
| Breeds associated:
n/a
|
| Design: | Animals were subjected to whole-genome sequencing, and GWAS were performed for body conformation traits. A total of 16,776,605 SNPs were used for analysis. |
| Analysis: | Mixed linear models were used. |
| Software: | Picard v1.129, Samtools v1.10, GATK v3.4.46, Beagle 5.0, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Gu B, Sun R, Fang X, Zhang J, Zhao Z, Huang D, Zhao Y, Zhao Y |
| Affiliation: | College of Animal Science and Technology, Southwest University, Chongqing 400715, China |
| Title: | Genome-Wide Association Study of Body Conformation Traits by Whole Genome Sequencing in Dazu Black Goats |
| Journal: | Animals : an open access journal from MDPI, 2022, 12(5):548 |
| Links: |
PubMed | Abstract | List all data
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