QTL Map Information |
Chromosome: | 23 |
QTL Peak Location: | n/a |
QTL Span: | n/a 8.1-8.1 (Mbp) |
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Upper, "Suggestive": | n/a |
Upper, "Significant": | n/a |
Peak: | rs268243170 |
Lower, "Significant": | n/a |
Lower, "Suggestive": | n/a |
Marker type: | SNP |
Analysis type: | Association |
Model tested: | - |
Test base: | Experiment-wise |
Threshold significance level: | Significant |
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FDR | 1.01E-2 | Dominance effect: | n/a |
Additive effect: | n/a |
Associated Gene: | n/a |
Cis/Trans acting type: |  |
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Extended information: |
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QTL Experiment in Brief |
Animals: | Animals were Murciano-Granadina goats. |
Breeds associated:
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Design: | Animals were genotyped using the Illumina OvineSNP50 BeadChip and GWAS were performed for milk traits. A total of 48,722 SNPs were used for analysis. |
Analysis: | A linear mixed model was used. |
Software: | EIGENSOFT v6.1.4, GEMMA v0.98, BEDTools v2.25.0, PLINK v1.9 |
Notes: | |
Links: | Edit |
Reference |
Authors: | Guan D, Landi V, Luigi-Sierra MG, Delgado JV, Such X, Castelló A, Cabrera B, Mármol-Sánchez E, Fernández-Alvarez J, de la Torre Casañas JLR, Martínez A, Jordana J, Amills M |
Affiliation: | Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain |
Title: | Analyzing the genomic and transcriptomic architecture of milk traits in Murciano-Granadina goats |
Journal: | Journal of animal science and biotechnology, 2020, 11: 35 |
Links: |
PubMed | Abstract | List all data
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