Release 56
(Apr 24, 2025)

QTL 314210 Description:

 Trait Information
Trait name: Milk yield Vertebrate Trait Ontology: Milk amount
Trait details: milk yield normalized to 210 days Product Trait Ontology: n/a
Symbol: MY Clinical Measurement Ontology: Milk yield
 QTL Map Information
Chromosome:23
QTL Peak Location:n/a
QTL Span:n/a
8.1-8.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs268243170
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:-
Test base:Experiment-wise
Threshold significance level:Significant
FDR1.01E-2
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Murciano-Granadina goats.
     Breeds associated:
    Design:Animals were genotyped using the Illumina OvineSNP50 BeadChip and GWAS were performed for milk traits. A total of 48,722 SNPs were used for analysis.
    Analysis:A linear mixed model was used.
    Software:EIGENSOFT v6.1.4, GEMMA v0.98, BEDTools v2.25.0, PLINK v1.9
    Notes: 
    Links:Edit

     Reference
    Authors:Guan D, Landi V, Luigi-Sierra MG, Delgado JV, Such X, Castelló A, Cabrera B, Mármol-Sánchez E, Fernández-Alvarez J, de la Torre Casañas JLR, Martínez A, Jordana J, Amills M
    Affiliation:Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain
    Title:Analyzing the genomic and transcriptomic architecture of milk traits in Murciano-Granadina goats
    Journal:Journal of animal science and biotechnology, 2020, 11: 35
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #32175082
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  • Cite this Data:

    Animal QTLdb: QTL314210 was published in 2020, and was curated into QTLdb on 2025-02-20. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:314210

     

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