| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | 658.78 (cM) |
| QTL Span: | 658.78-658.78 (cM)
42.0-42.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs68928539 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Franches-Montagnes horses. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina Equine SNP50 BeadChip and analyzed for maxillary prognathism phenotypes. A total of 38124 SNPs were used for analysis. |
| Analysis: | A mixed model was used. |
| Software: | PLINK, GenABEL, QVALUE, EMMAX |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Signer-Hasler H, Neuditschko M, Koch C, Froidevaux S, Flury C, Burger D, Leeb T, Rieder S |
| Affiliation: | Swiss National Stud Farm, Agroscope, Avenches, Switzerland |
| Title: | A chromosomal region on ECA13 is associated with maxillary prognathism in horses |
| Journal: | PloS one, 2014, 9(1): e86607 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Maxillary prognathism |
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