Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 121984 Description:

 Trait Information
Trait name: Skin color Vertebrate Trait Ontology: Skin pigmentation trait
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: SKCOL Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:470.3 (cM)
QTL Span:403-474 (cM)
125.4-147.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":ADL0146
Peak:
Lower, "Significant":MCW0157
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
LOD_score1.62
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #121984
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  •  QTL Experiment in Brief
    Animals:Birds were Korean Native Chickens.
     Breeds associated:
    n/a
    Design:Animals were genotyped using 132 microsatellites and 39 SNPs were analyzed for shank skin color traits.
    Analysis:A multi-point variance component linkage analysis approach was used.
    Software:CRIMAP, SOLAR, ASReml, GridQTL
    Notes: 
    Links:Edit

     Reference
    Authors:Jin S, Lee J H, Seo D W, Cahyadi M, Choi N R, Heo K N, Jo C, Park H B
    Affiliation:Subtropical Livestock Research Institute, National Institute of Animal Science, Jeju 63242, Korea
    Title:A Major Locus for Quantitatively Measured Shank Skin Color Traits in Korean Native Chicken
    Journal:Asian-Australasian journal of animal sciences, 2016, 29(11): 1555-1561
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:shank color L*
    User inputs on reference #27383802
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  • Cite this Data:

    Animal QTLdb: QTL121984 was published in 2016, and was curated into QTLdb on 2016-11-14. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:121984

     

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