| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
2.5-2.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs15474369 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.00409 | | Dominance effect: | n/a |
| Additive effect: | 0.29 |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Chickens were from two elite breeding lines of egg-laying chickens: Line 1 (white egg) and Line 2 (brown egg). |
| Breeds associated:
n/a
|
| Design: | Birds were genotyped for about 3000 SNPs using an Illumina array and analyzed for egg quality and production traits. |
| Analysis: | SNP-wise and genome-wise analyses were conducted, using mixed model analysis and BayesB analysis, respectively. |
| Software: | SAS, ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Abasht B, Sandford E, Arango J, Settar P, Fulton JE, O'Sullivan NP, Hassen A, Habier D, Fernando RL, Dekkers JCM, Lamont SJ |
| Affiliation: | Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, IA 50011, USA |
| Title: | Extent and consistency of linkage disequilibrium and identification of DNA markers for production and egg quality traits in commercial layer chicken populations |
| Journal: | BMC genomics, 2009, 10 Suppl 2: S2 |
| Links: |
PubMed | Abstract | List all data
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