| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
154.2-154.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs315253804 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 7.08E-7 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were from a Chinese indigenous chicken population. |
| Breeds associated:
n/a
|
| Design: | Birds were genotyped using the Affymetrix 600K Axiom HD chicken genotyping array, with data imputed to full sequence, and analyzed for carcass traits. A total of 8,626,020 SNPs were used for analysis. |
| Analysis: | A mixed linear model was used. |
| Software: | PLINK, GATK, FImpute, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Huang S, He Y, Ye S, Wang J, Yuan X, Zhang H, Li J, Zhang X, Zhang Z |
| Affiliation: | Guangdong Provincial Key Lab of Agro-Animal Genomics and Molecular Breeding, College of Animal Science, South China Agricultural University, Guangzhou, 510642, China |
| Title: | Genome-wide association study on chicken carcass traits using sequence data imputed from SNP array |
| Journal: | Journal of applied genetics, 2018, 59(3):335-344 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | eviscerated weight with giblets |
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