Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 16830 Description:

 Trait Information
Trait name: Abdominal fat weight Vertebrate Trait Ontology: Abdominal fat pad mass
Reported name: Abdominal fat weight Product Trait Ontology: n/a
Symbol: AF Clinical Measurement Ontology: Abdominal fat pad weight
 QTL Map Information
Chromosome:5
QTL Peak Location:168 (cM)
QTL Span:166-182 (cM)
49.1-53.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:QTL
Model tested:Epistatic
Test base:Chromosome-wise
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
Epistatic QTL found:QTL16829 QTL16830

User inputs on QTL #16830
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Birds were from a cross between two chicken lines divergently selected for abdominal fatness.
     Breeds associated:
    n/a
    Design:Birds were genotyped for 16 markers on chromosome 5 and analyzed for abdominal fatness.
    Analysis:An interval mapping method was used.
    Software:R software, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Blum Y, Le Mignon G, Causeur D, Filangi O, Desert C, Demeure O, Le Roy P, Lagarrigue S
    Affiliation:INRA, UMR598, Genetique Animale, IFR140 GFAS, 35000 Rennes, France
    Title:Complex trait subtypes identification using transcriptome profiling reveals an interaction between two QTL affecting adiposity in chicken.
    Journal:BMC genomics, 2011, 12:567
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #22103296
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL16830 was published in 2011, and was curated into QTLdb on 2012-04-24. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:16830

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team