| QTL Map Information |
|---|
| Chromosome: | Z |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
43.1-43.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs16689511 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were from a reciprocal cross between an Iranian native chicken (Urmia strain) and an Arian line (commercial fast-growing broiler strain). |
| Breeds associated:
n/a
|
| Design: | Birds were genotyped using the Illumina Chicken SNP60 BeadChip and analyzed for shank length and diameter at different stages. A total of 48,439 SNPs were used for analysis. |
| Analysis: | GWAS was performed using the generalize linear model and compressed mixed linear model. |
| Software: | PLINK, TASSEL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Emrani H, Masoudi A A, Vaez Torshizi R, Ehsani A |
| Affiliation: | Department of Animal Science, Faculty of Agriculture, Tarbiat Modares University, PO Box 14115-336, Tehran, Iran |
| Title: | Genome-wide association study of shank length and diameter at different developmental stages in chicken F2 resource population |
| Journal: | Animal Genetics, 2020, 51(5):722-730 |
| Links: |
PubMed | Abstract | List all data
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