| QTL Map Information |
|---|
| Chromosome: | Z |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
79.3-79.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs317250881 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.0166 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Chickens were Tibetan pure-line hens. |
| Breeds associated:
n/a
|
| Design: | Birds were genotyped using the 600K Affymetrix Axiom HD genotyping array and analyzed for dermal shank pigmentation. A total of 439,000 SNPs were used for analysis. |
| Analysis: | Chi-squared tests were used. |
| Software: | PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li G, Li D, Yang N, Qu L, Hou Z, Zheng J, Xu G, Chen S |
| Affiliation: | National Engineering Laboratory for Animal Breeding and MOA Key Laboratory of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China |
| Title: | A genome-wide association study identifies novel single nucleotide polymorphisms associated with dermal shank pigmentation in chickens |
| Journal: | Poultry science, 2015, 93(12): 2983-7 |
| Links: |
PubMed | Abstract | List all data
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