| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
48.2-48.2 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs317659987 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Chickens were from two groups: high egg production (White Leghorn, Dwarf, Rhode Island Red) and low egg production (Beijing You, Henan Game, Xishuangbanna Game, Turpan, Zhangzhou Game, Luxi Game, Tibetan, Hongshan, Taihe Silkies). |
| Breeds associated:
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| Design: | Birds were genotyped using the 600K Affymetrix Axiom Chicken Genotyping Array and association analysis was performed for egg number. A total of 456,647 SNPs were used for analysis. |
| Analysis: | A univariate mixed linear model was used for GWAS. |
| Software: | PLINK 1.9, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhao X, Nie C, Zhang J, Li X, Zhu T, Guan Z, Chen Y, Wang L, Lv XZ, Yang W, Jia Y, Ning Z, Li H, Qu C, Wang H, Qu L |
| Affiliation: | Department of Animal Genetics and Breeding, State Key Laboratory of Animal Nutrition, National Engineering Laboratory for Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China |
| Title: | Identification of candidate genomic regions for chicken egg number traits based on genome-wide association study |
| Journal: | BMC genomics, 2021, 22(1): 610 |
| Links: |
PubMed | Abstract | List all data
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