| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
168.4-168.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs317160250 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | HTR2A (5-hydroxytryptamine receptor 2A) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were from a population developed by reciprocal crosses between Dongxiang blue-shelled chickens and White Leghorn. |
| Breeds associated:
n/a
|
| Design: | Chickens were genotyped using the Affymetrix Axiom 600K Chicken Genotyping Array, and GWAS were performed for growth and production traits. A total of 435,243 SNPs were used for analysis. |
| Analysis: | A linear mixed model was used. |
| Software: | Beagle v4, PLINK v1.90b6.21, GEMMA, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Guo J, Qu L, Shao D, Wang Q, Li Y, Dou T, Wang X, Hu Y, Tong H |
| Affiliation: | Jiangsu Institute of Poultry Science, Yangzhou 225125, China |
| Title: | Genetic Architecture of Abdominal Fat Deposition Revealed by a Genome-Wide Association Study in the Laying Chicken |
| Journal: | Genes, 2023, 15(1):10 |
| Links: |
PubMed | Abstract | List all data
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