| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
0.6-0.6 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs735698483 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | COL5A2 (collagen type V alpha 2 chain) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were Rhode Island Red and White Leghorn chickens. |
| Breeds associated:
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| Design: | Birds were subjected to whole-genome sequencing, and GWAS was performed for age at first egg. A total of 4,717,481 (White Leghorn) or 4,882,037 SNPs (Rhode Island Red) were used for GWAS. |
| Analysis: | The general linear model was used for GWAS. |
| Software: | SAMtools v1.16.1, Picard tools v2.25.2, PLINK, TASSEL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Chen A, Zhao X, Wen J, Zhao X, Wang G, Zhang X, Ren X, Zhang Y, Cheng X, Yu X, Mei X, Wang H, Guo M, Jiang X, Wei G, Wang X, Jiang R, Guo X, Ning Z, Qu L |
| Affiliation: | National Engineering Laboratory for Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China |
| Title: | Genetic parameter estimation and molecular foundation of chicken egg-laying trait |
| Journal: | Poultry science, 2024, 103(6): 103627 |
| Links: |
PubMed | Abstract | List all data
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