| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | n/a
52.5-52.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs313251659 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Suggestive |
 |
P_values | 0.098 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were Cobb500 broilers. |
| Breeds associated:
n/a
|
| Design: | Birds were genotyped using the 580K Affymietrix Axiom HD genotyping array and analyzed for traits related to response to Eimeria maxima infection. A total of 443,587 SNPs were used for analysis. |
| Analysis: | The genome-wide efficient mixed model association (GEMMA) algorithm for the univariate linear mixed model was used. |
| Software: | PLINK, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Hamzić E, Buitenhuis B, Hérault F, Hawken R, Abrahamsen MS, Servin B, Elsen JM, Pinard-van der Laan MH, Bed'Hom B |
| Affiliation: | UMR1313 Animal Genetics and Integrative Biology Unit, INRA, Domaine de Vilvert, 78350, Jouy-en-Josas, France |
| Title: | Genome-wide association study and biological pathway analysis of the Eimeria maxima response in broilers |
| Journal: | Genetics, Selection, Evolution : GSE, 2015, 47: 91 |
| Links: |
PubMed | Abstract | List all data
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