Release 56
(Apr 24, 2025)

QTL 130470 Description:

 Trait Information
Trait name: Sodium level Vertebrate Trait Ontology: Blood sodium amount
Reported name: Sodium concentration in whole blood (WBSC) Product Trait Ontology: n/a
Symbol: BSOD Clinical Measurement Ontology: Blood sodium level
 QTL Map Information
Chromosome:7
QTL Peak Location:37.50 (cM)
QTL Span:37.50-37.50 (cM)
25.3-25.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values0.0092
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animal breed (IDs) involved: 367�455�461�495 Animal breed (IDs) involved: 367455461495
     Breeds associated:
    Design:Animals were genotyped for amino acid substitutions in SLC12A6 and SLC12A4 using custom Taqman assays. Whole blood sodium and potassium were measured by atomic absorbance spectroscopy. The final marker set included 8 SNPs.
    Analysis:Single-SNP linear mixed models were used accounting for breed and genotype as fixed effects, and sire nested within breed treated as random.
    Software:SAS 9.2
    Notes: 
    Links:Edit

     Reference
    Authors:White SN, Oliveira RD, Mousel MR, Gonzalez MV, Highland MA, Herndon MK, Taylor JB, Knowles DP
    Affiliation:USDA-ARS Animal Disease Resedarch Unit, 3003 ADBF, WSU, Pullman, WA 99164, USA
    Title:Underdominant KCC3b R31I association with blood sodium concentration in domestic sheep suggests role in oligomer function
    Journal:Animal Genetics, 2017, 48(5):626-627
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #28748545
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  • Cite this Data:

    Animal QTLdb: QTL130470 was published in 2017, and was curated into QTLdb on 2017-05-19. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:130470

     

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