| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 102.80 (cM) |
| QTL Span: | 102.80-102.80 (cM)
81.2-81.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs418747104 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Swiss White Alpine sheep. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina OvineHD BeadChip and analyzed for susceptibility to footrot. A total of 503,411 SNPs were used for analysis. |
| Analysis: | A mixed linear model was used. |
| Software: | PLINK, GCTA, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Niggeler A, Tetens J, Stäuble A, Steiner A, Drögemüller C |
| Affiliation: | Institute of Genetics, Vetsuisse Faculty, University of Bern, Bremgartenstrasse 109a, 3012, Bern, Switzerland |
| Title: | A genome-wide significant association on chromosome 2 for footrot resistance/susceptibility in Swiss White Alpine sheep |
| Journal: | Animal genetics, 2017, 48(6): 712-715 |
| Links: |
PubMed | Abstract | List all data
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