Pig QTL Database

Release 56
(Apr 24, 2025)

. . . from browsing trait ontology

References

On trait: Carcass length

A. Stratil, M. Van Poucke, H. Bartenschlager, A. Knoll, M. Yerle, L. J. Peelman, M. Kopecny (2006). Porcine OGN and ASPN: mapping, polymorphisms and use for quantitative trait loci identification for growth and carcass traits in a Meishan x Pietrain intercross Animal Genetics,37: 415-418. [see all QTL by this paper]
Andersson-Eklund L, Marklund L, Lundstrom K, Haley CS, Andersson K, Hansson I,Moller M, Andersson L. (1998). Mapping quantitative trait loci for carcass and meat quality traits in a wildboar x Large White intercross. J Anim Sci,Mar;76(3):694-700.. [see all QTL by this paper]
Becker D, Wimmers K, Luther H, Hofer A, Leeb T. (2013). A genome-wide association study to detect QTL for commercially important traits in Swiss Large White boars. PloS one,8 (2): e55951. [see all QTL by this paper]
Blaj I, Tetens J, PreuÃŸ S, Bennewitz J, Thaller G (2018). Genome-wide association studies and meta-analysis uncovers new candidate genes for growth and carcass traits in pigs PloS one,13(10): e0205576. [see all QTL by this paper]
CasirÃ³ S, Velez-Irizarry D, Ernst C W, Raney N E, Bates R O, Charles M G, Steibel J P (2017). Genome-wide association study in an F2 Duroc x Pietrain resource population for economically important meat quality and carcass traits Journal of animal science,95(2): 545-558. [see all QTL by this paper]
Choi I, Steibel JP, Bates RO, Raney NE, Rumph JM, Ernst CW (2011). Identification of Carcass and Meat Quality QTL in an F(2) Duroc x Pietrain Pig Resource Population Using Different Least-Squares Analysis Models. Frontiers in genetics,2: 18. [see all QTL by this paper]
D. B. Edwards, C. W. Ernst, N. E. Raney, M. E. Doumit, M. D. Hoge, and R. O. Bates (2008). Quantitative trait locus mapping in an F2 Duroc x Pietrain resource population: II. Carcass and meat quality traits J Anim Sci,86:254-266. [see all QTL by this paper]
de Koning, D J; Pong-Wong, R; Varona, L; Evans, G J; Giuffra, E; Sanchez, A; Plastow, G; Noguera, J L; Andersson, L; Haley, C S; (2003). Full pedigree quantitative trait locus analysis in commercial pigs using variance components. J Anim Sci,81 (9): 2155-63. [see all QTL by this paper]
Demeure, O; Sanchez, M P; Riquet, J; Iannuccelli, N; Demars, J; Feve, K; Kernaleguen, L; Gogue, J; Billon, Y; Caritez, J C; Mila (2005). Exclusion of the swine leukocyte antigens as candidate region and reduction of the position interval for the Sus scrofa chromosome 7 QTL affecting growth and fatness. J Anim Sci,83 (9): 1979-87. [see all QTL by this paper]
Eduard Murani, Maria Muraniova, Siriluck Ponsuksili, Karl Schellander, Klaus Wimmers (2006). Molecular characterization and evidencing of the porcine CRH gene as a functional-positional candidate for growth and body composition Biochem Biophys Res Commun.,342(2):394-405. [see all QTL by this paper]
Estelle, J; Perez-Enciso, M; Mercade, A; Varona, L; Alves, E; aÃ¡nchez, A; Folch, J M (2006). Characterization of the porcine FABP5 gene and its association with the FAT1 QTL in an Iberian by Landrace cross. Animal genetics,37 (6): 589-91. [see all QTL by this paper]
Evans, G J; Giuffra, E; Sanchez, A; Kerje, S; Davalos, G; Vidal, O; IllÃ¡n, S; Noguera, J L; Varona, L; Velander, I; Southwood, (2004). Identification of quantitative trait loci for production traits in commercial pig populations. Genetics,2 (164): 621-7. [see all QTL by this paper]
Fu M, Zhou X, Liu Z, Wang T, Liu B (2023). Genome-wide association study reveals a genomic region on SSC7 simultaneously associated with backfat thickness, skin thickness and carcass length in a Large White Ã— Tongcheng advanced generation intercross resource population Animal Genetics,54(2):216-219. [see all QTL by this paper]
G. Yue, A. Stratil, S. Cepica, J. Schröffel Jr., d. Schröffelova, L. Fontanesi, M. Cagnazzo, G. Moser, H. Bartenschlager, G. Rei (2003). Linkage and QTL mapping for Sus scrofa chromosome 7. J Anim Breed Genet,120(1). [see all QTL by this paper]
Gong H, Xiao S, Li W, Huang T, Huang X, Yan G, Huang Y, Qiu H, Jiang K, Wang X, Zhang H, Tang J, Li L, Li Y, Wang C, Qiao C, Ren J, Huang L, Yang B (2019). Unravelling the genetic loci for growth and carcass traits in Chinese Bamaxiang pigs based on a 1.4 million SNP array Journal of animal breeding and genetics,136(1):3-14. [see all QTL by this paper]
H. Geldermann, E. Muller, G. Moser, G. Reiner, H. Bartenschlager, S. Cepica, A. Stratil, J. Kuryl, C. Moran, R. Davoli and C. Brunsch (2003). Genome-wide linkage and QTL mapping in porcine F2 families. J Anim Breed Genet,120:363-393. [see all QTL by this paper]
Harmegnies, N; Davin, F; De Smet, S; Buys, N; Georges, M; Coppieters, W; (2006). Results of a whole-genome quantitative trait locus scan for growth, carcass composition and meat quality in a porcine four-way cross. Animal Genetics,37 (6): 543-53. [see all QTL by this paper]
Kim, J-J; Rothschild, M F; Beever, J; Rodriguez-Zas, S; Dekkers, J C M (2005). Joint analysis of two breed cross populations in pigs to improve detection and characterization of quantitative trait loci. J Anim Sci,83 (6): 1229-40. [see all QTL by this paper]
Knott SA, Nystrom PE, Andersson-Eklund L, Stern S, Marklund L, Andersson L,Haley CS. (2002). Approaches to interval mapping of QTL in a multigeneration pedigree: the exampleof porcine chromosome 4. Animal Genetics,Feb;33(1):26-32.. [see all QTL by this paper]
Li J, Peng S, Zhong L, Zhou L, Yan G, Xiao S, Ma J, Huang L (2021). Identification and validation of a regulatory mutation upstream of the BMP2 gene associated with carcass length in pigs Genetics, Selection, Evolution : GSE,53(1): 94. [see all QTL by this paper]
Liu K, Hou L, Yin Y, Wang B, Liu C, Zhou W, Niu P, Li Q, Huang R, Li P (2023). Genome-wide association study reveals new QTL and functional candidate genes for the number of ribs and carcass length in pigs Animal Genetics,54(4):435-445. [see all QTL by this paper]
Liu, G; Jennen, D G J; Tholen, E; Juengst, H; Kleinwachter, T; Holker, M; Tesfaye, D; Un, G; Schreinemachers, H-J; Murani, E; (2007). A genome scan reveals QTL for growth, fatness, leanness and meat quality in a Duroc-Pietrain resource population. Animal genetics,38 (3): 241-52. [see all QTL by this paper]
Liu, Guisheng; Kim, Jong Joo; Jonas, Elisebeth; Wimmers, Klaus; Ponsuksili, Siriluck; Murani, Eduard; Phatsara, Chirawath; Thole (2008). Combined line-cross and half-sib QTL analysis in Duroc-Pietrain population. Mammalian genome,19 (6): 429-38. [see all QTL by this paper]
M. Dragos-Wendrich, I. Sternstein, C. Brunsch, G. Moser, H. Bartenschlager, G. Reiner, H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome 14. J Anim Breed Genet,120(1): 111-118. [see all QTL by this paper]
M. Pierzchala, D. Cieslak, G. Reiner, H. Bartenschlager, G. Moser, H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome 17. J Anim Breed Genet,120(1): 132-137. [see all QTL by this paper]
Ma, J; Ren, J; Guo, Y; Duan, Y; Ding, N; Zhou, L; Li, L; Yan, X; Yang, K; Huang, L; Song, Y; Xie, J; Milan, D; Huang, L (2009). Genome-wide identification of quantitative trait loci for carcass composition and meat quality in a large-scale White Duroc x Chinese Erhualian resource population Animal Genetics,40 (5): 637-47. [see all QTL by this paper]
Malek M, Dekkers JC, Lee HK, Baas TJ, Rothschild MF. (2001). A molecular genome scan analysis to identify chromosomal regions influencingeconomic traits in the pig. I. Growth and body composition. Mammalian genome,Aug;12(8):630-6.. [see all QTL by this paper]
Marklund L, Nystrom PE, Stern S, Andersson-Eklund L, Andersson L. (1999). Confirmed quantitative trait loci for fatness and growth on pig chromosome 4. Heredity,Feb;82 (Pt 2):134-41.. [see all QTL by this paper]
Mercade, A; Perez-Enciso, M; Varona, L; Alves, E; Noguera, J L; Sanchez, A; Folch, J M (2006). Adipocyte fatty-acid binding protein is closely associated to the porcine FAT1 locus on chromosome 4. J Anim Sci,84 (11): 2907-13. [see all QTL by this paper]
Mercade, Anna; Estelle, Jordi; Noguera, Jose L; Folch, Josep M; Varona, Luis; Silio, Luis; Sanchez, Armand; Perez-Enciso, Miguel (2005). On growth, fatness, and form: a further look at porcine chromosome 4 in an Iberian x Landrace cross. Mammalian genome,16 (5): 374-82. [see all QTL by this paper]
Mo XY, Lan J, Jiao QZ, Xiong YZ, Zuo B, Li FE, Xu DQ, Lei MG (2011). Molecular characterization, expression pattern and association analysis of the porcine BTG2 gene Mol Biol Rep,38(7):4389-96. [see all QTL by this paper]
Nezer C, Moreau L, Wagenaar D, Georges M. (2002). Results of a whole genome scan targeting QTL for growth and carcass traits in a Pietran x Large White intercross. Genet Sel Evol,May-Jun;34(3):371-87.. [see all QTL by this paper]
NoskovÃ¡ A, Mehrotra A, Kadri NK, Lloret-Villas A, Neuenschwander S, Hofer A, Pausch H (2023). Comparison of two multi-trait association testing methods and sequence-based fine mapping of six additive QTL in Swiss Large White pigs BMC Genomics,24(1): 192. [see all QTL by this paper]
P. Beeckmann, G. Moser, H. Bartenschlager, G. Reiner, and H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome 8. J Anim Breed Genet,120(1); 66-73. [see all QTL by this paper]
P. Beeckmann, J. Schröffel Jr, G. Moser, H. Bartenschlager, G. Reiner, and H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome 1. J Anim Breed Genet,120(1):1-10. [see all QTL by this paper]
P. Beeckmann, J. Schröffel Jr., G. Moser, H. Bartenschlager, G. Reiner and H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa Chromosome 3. J Anim Breed Genet,120(1):20-27. [see all QTL by this paper]
P. Karlskov-Mortensen,C. S. Bruun, M. H. Braunschweig, M. Sawera, E. Markljung, A. C. Enfalt, I. Hedebro-Velander, A . Josell, G (2005). Genome-wide identification of quantitative trait loci in a cross between Hampshire and Landrace I: carcass traits Animal Genetics,Volume 10 Issue 1111. [see all QTL by this paper]
Paszek, A A; Wilkie, P J; Flickinger, G H; Miller, L M; Louis, C F; Rohrer, G A; Alexander, L J; Beattie, C W; Schook, L B; (2001). Interval mapping of carcass and meat quality traits in a divergent swine cross. Animal biotechnology,12 (2): 155-65. [see all QTL by this paper]
Perez-Enciso, M; Mercade, A; Bidanel, J P; Geldermann, H; Cepica, S; Bartenschlager, H; Varona, L; Milan, D; Folch, J M (2005). Large-scale, multibreed, multitrait analyses of quantitative trait loci experiments: the case of porcine X chromosome. J Anim Sci,83 (10): 2289-96. [see all QTL by this paper]
Ponsuksili, S; Murani, E; Schellander, K; Schwerin, M; Wimmers, K (2005). Identification of functional candidate genes for body composition by expression analyses and evidencing impact by association analysis and mapping. Biochimica et biophysica acta,1730 (1): 31-40. [see all QTL by this paper]
Ramos, A M; Pita, R H; Malek, M; Lopes, P S; Guimaraes, S E F; Rothschild, M F (2009). Analysis of the mouse high-growth region in pigs. Journal of animal breeding and genetics ,126(5): 404-12. [see all QTL by this paper]
Revilla M, Puig-Oliveras A, CastellÃ³ A, Crespo-Piazuelo D, Paludo E, FernÃ¡ndez AI, Ballester M, Folch JM (2017). A global analysis of CNVs in swine using whole genome sequence data and association analysis with fatty acid composition and growth traits PloS one,12(5): e0177014. [see all QTL by this paper]
Reyer H, Ponsuksili S, Wimmers K, Murani E (2013). Association of N-terminal domain polymorphisms of the porcine glucocorticoid receptor with carcass composition and meat quality traits Animal genetics,45(1):125-9. [see all QTL by this paper]
Rohrer GA, Keele JW. (1998). Identification of quantitative trait loci affecting carcass composition in swine: II. Muscling and wholesale product yield traits. J Anim Sci,Sep;76(9):2255-62.. [see all QTL by this paper]
S. Cepica, A. Stratil, M. Kopecny, P. Blazkova, J. Schröffel Jr, R. Davoli, L. Fontanesi, G. Reiner, H. Bartenshlager, G. Moser (2003). Linkage and QTL mapping for Sus scrofa chromosome 4.. J Anim Breed Genet,120(1) 28-37. [see all QTL by this paper]
S. Cepica, G. Reiner, H. Bartenschlager, G. Moser, H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome X. J Anim Breed Genet,120(1): 144-151. [see all QTL by this paper]
S. Ponsuksili, S. Chomdej, E. Murani, U. Bla¨ser, H.-J. Schreinemachers, K. Schellander and K. Wimmers (2005). SNP detection and genetic mapping of porcine genes encoding enzymes in hepatic metabolic pathways and evaluation of linkage with carcass traits Animal Genetics,36(6):477-83. [see all QTL by this paper]
S. S. Lee, Y. Chen, C. Moran, A. Stratil, G. Reinder, H. Bartenschlager, G. Moser and H. Geldermann (2003). Linkage and QTL mapping for Sus scrofa chromosome 5. J Anim Breed Genet,120(1): 38-44. [see all QTL by this paper]
S. S. Lee, Y. Chen, C. Moran, S. Cepica, G. Reiner, H. Bartenschlager, G. Moser and H. Geldermann (2003). LInkage and QTL mapping for Sus scrofa chromosome 2. J Anim Breed Genet,120(1): 11-19. [see all QTL by this paper]
Sanchez MP, Tribout T, Iannuccelli N, Bouffaud M, Servin B, Tenghe A, Dehais P, Muller N, Del Schneider MP, Mercat MJ, Rogel-Gaillard C, Milan D, Bidanel JP, Gilbert H (2014). A genome-wide association study of production traits in a commercial population of Large White pigs: evidence of haplotypes affecting meat quality Genetics, Selection, Evolution : GSE,46: 12. [see all QTL by this paper]
Sato S, Oyamada Y, Atsuji K, Nade T, Sato S, Kobayashi E, Mitsuhashi T, NirasawaK, Komatsuda A, Saito Y, Terai S, Hayashi T, Sug (2003). Quantitative trait loci analysis for growth and carcass traits in a Meishan xDuroc F2 resource population. J Anim Sci,Dec;81(12):2938-49.. [see all QTL by this paper]
Sato S, Uemoto Y, Kikuchi T, Egawa S, Kohira K, Saito T, Sakuma H, Miyashita S, Arata S, Kojima T, Suzuki K (2016). SNP- and haplotype-based genome-wide association studies for growth, carcass, and meat quality traits in a Duroc multigenerational population BMC genetics,17: 60. [see all QTL by this paper]
Schmid M, Maushammer M, PreuÃŸ S, Bennewitz J (2018). Mapping QTL for production traits in segregating PiÃ©train pig populations using genome-wide association study results of F2 crosses. Animal genetics,49(4):317-320. [see all QTL by this paper]
Shen H, Zhao SH, Cao JH, Li XY, Fan B (2011). Porcine MuRF2 and MuRF3: molecular cloning, expression and association analysis with muscle production traits Mol Biol Rep,38(8):5115-23. [see all QTL by this paper]
Soma Y, Uemoto Y, Sato S, Shibata T, Kadowaki H, Kobayashi E, Suzuki K (2011). Genome-wide mapping and identification of new quantitative trait loci affecting meat production, meat quality, and carcass traits within a Duroc purebred population. Journal of animal science,89(3): 601-8. [see all QTL by this paper]
Steibel Juan Pedro, Bates Ronald O, Rosa Guilherme J M, Tempelman Robert J, Rilington Valencia D, Ragavendran Ashok, Raney Nancy E, Ramos Antonio Marcos, Cardoso Fernando F, Edwards David B, Ernst Catherine W, (2011). Genome-wide linkage analysis of global gene expression in loin muscle tissue identifies candidate genes in pigs. PloS one,6 (2): e16766. [see all QTL by this paper]
SU Yu-hong, MA Bao-yu, XIONG Yuan-zhu (2004). Genetic location of body composition traits in pigs. Hereditas (Beijing),26(2):163-166. [see all QTL by this paper]
SuÃ¡rez-Mesa R, Ros-Freixedes R, Pena RN, Reixach J, Estany J (2024). Impact of the leptin receptor gene on pig performance and quality traits Scientific reports,14(1): 10652. [see all QTL by this paper]
Thomsen, H; Lee, H K; Rothschild, M F; Malek, M; Dekkers, J C M; (2004). Characterization of quantitative trait loci for growth and meat quality in a cross between commercial breeds of swine. J Anim Sci,82 (8): 2213-28. [see all QTL by this paper]
Uemoto, Y; Nagamine, Y; Kobayashi, E; Sato, S; Tayama, T; Suda, Y; Shibata, T; Suzuki, K (2008). Quantitative trait loci analysis on Sus scrofa chromosome 7 for meat production, meat quality, and carcass traits within a Duroc purebred population. J Anim Sci,86 (11): 2833-9. [see all QTL by this paper]
Varona L, Ovilo C, Clop A, Noguera JL, Perez-Enciso M, Coll A, Folch JM,Barragan C, Toro MA, Babot D, Sanchez A. (2002). QTL mapping for growth and carcass traits in an Iberian by Landrace pigintercross: additive, dominant and epistatic effects. Genet Res.,Oct;80(2):145-54.. [see all QTL by this paper]
Velez-Irizarry D, Casiro S, Daza KR, Bates RO, Raney NE, Steibel JP, Ernst CW (2019). Genetic control of longissimus dorsi muscle gene expression variation and joint analysis with phenotypic quantitative trait loci in pigs BMC genomics,20(1): 3. [see all QTL by this paper]
Wei, W H; Duan, Y; Haley, C S; Ren, J; de Koning, D J; Huang, L S (2011). High throughput analyses of epistasis for swine body dimensions and organ weights. Animal genetics,42(1):15-21. [see all QTL by this paper]
Weisz F, Bartenschlager H, Knoll A, Mileham A, Deeb N, Geldermann H, Cepica S (2012). Association analyses of porcine SERPINE1 reveal sex-specific effects on muscling, growth, fat accretion and meat quality Animal genetics,43(5): 614-9. [see all QTL by this paper]
Wimmers K, Murani E, Ponsuksili S, Yerle M, Schellander K. (2002). Detection of quantitative trait loci for carcass traits in the pig by usingAFLP. Mammalian genome,Apr;13(4):206-10.. [see all QTL by this paper]
Xiong Q, Chai J, Deng C, Jiang S, Liu Y, Huang T, Suo X, Zhang N, Li X, Yang Q, Chen M, Zheng R (2012). Characterization of porcine SKIP gene in skeletal muscle development: polymorphisms, association analysis, expression and regulation of cell growth in C2C12 cells. Meat science,92 (4): 490-7. [see all QTL by this paper]
Xu Z, Lin Q, Cai X, Zhong Z, Teng J, Li B, Zeng H, Gao Y, Cai Z, Wang X, Shi L, Wang X, Wang Y, Zhang Z, Lin Y, Liu S, Yin H, Bai Z, Wei C, Zhou J, Zhang W, Zhang X, Shi S, Wu J, Diao S, Liu Y, Pan X, Feng X, Liu R, Su Z, Chang C, Zhu Q, Wu Y, The PigGTEx Consortium, Zhou Z, Bai L, Li K, Wang Q, Pan Y, Xu Zhong, Peng X, Mei S, Mo D, Liu X, Zhang H, Yuan X, Liu Y, Liu G, Su G, Sahana G, Lund MS, Ma L, Xiang R, Shen X, Li P, Huang R, Ballester M, Piazuelo DC, Amills M, Clop A, Mortensen PK, Fredholm M, Tang G, Li M, Li X, Ding X, Li J, Chen Y, Zhang Q, Zhao Y, Zhao F, Fang L, Zhang Z (2024). Integrating large-scale meta-GWAS and PigGTEx resources to decipher the genetic basis of 232 complex traits in pigs. bioRxiv,. [see all QTL by this paper]
Yin S, Song G, Gao N, Gao H, Zeng Q, Lu P, Zhang Q, Xu K, He J (2023). Identifying Genetic Architecture of Carcass and Meat Quality Traits in a Ningxiang Indigenous Pig Population. Genes,14(7):1308. [see all QTL by this paper]
Yoo C K, Park H B, Lee J B, Jung E J, Kim B M, Kim H I, Ahn S J, Ko M S, Cho I C, Lim H T (2014). QTL analysis of body weight and carcass body length traits in an F2 intercross between Landrace and Korean native pigs Animal genetics,45(4): 589-92. [see all QTL by this paper]
Zhang H, Zhuang Z, Yang M, Ding R, Quan J, Zhou S, Gu T, Xu Z, Zheng E, Cai G, Yang J, Wu Z (2021). Genome-Wide Detection of Genetic Loci and Candidate Genes for Body Conformation Traits in Duroc Ã— Landrace Ã— Yorkshire Crossbred Pigs Frontiers in Genetics,12: 664343. [see all QTL by this paper]
Zhang R, Große-Brinkhaus C, Heidt H, Uddin MJ, Cinar MU, Tesfaye D, Tholen E, Looft C, Schellander K, Neuhoff C (2015). Polymorphisms and expression analysis of SOX-6 in relation to porcine growth, carcass, and meat quality traits Meat science,107: 26-32. [see all QTL by this paper]
Zhang Y, Gao T, Hu S, Lin B, Yan D, Xu Z, Zhang Z, Mao Y, Mao H, Wang L, Wang G, Xiong Y, Zuo B (2015). The Functional SNPs in the 5' Regulatory Region of the Porcine PPARD Gene Have Significant Association with Fat Deposition Traits PloS one,10(11): e0143734. [see all QTL by this paper]
Zhou L, Ji J, Peng S, Zhang Z, Fang S, Li L, Zhu Y, Huang L, Chen C, Ma J (2016). A GWA study reveals genetic loci for body conformation traits in Chinese Laiwu pigs and its implications for human BMI Mammalian genome ,27(11-12):610-621. [see all QTL by this paper]