Pig QTL Database

Release 55
(Dec 23, 2024)

Curator: Cari Park
Curated: 2023-05-05
Updated: 2024-04-23

Publication # 37007966 Details

Authors:	Xie X, Huang C, Huang Y, Zou X, Zhou R, Ai H, Huang L, Ma J (Contact: lushenghuang@hotmail.com; ma_junwu@hotmail.com)
Affiliation:	National Key Laboratory for Swine Genetic Improvement and Production Technology, Ministry of Science and Technology of China, Jiangxi Agricultural University, Nanchang, China
Title:	Genetic architecture for skeletal muscle glycolytic potential in Chinese Erhualian pigs revealed by a genome-wide association study using 1.4M SNP array
Journal:	Frontiers In Genetics, 14: 1141411 (2023)	DOI: 10.3389/fgene.2023.1141411
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Residual glycogen and glucose reported for chromosome(s): Chr.6: Asso:277165. Chr.7: Asso:277166, Asso:277167, Asso:277168. Chr.14: Asso:277169. Chr.15: Asso:277170. Chr.16: Asso:277171. Chr.17: Asso:277172. QTL for Glucose-6-phosphate content reported for chromosome(s): Chr.1: Asso:277173. Chr.7: Asso:277174, Asso:277175. Chr.8: Asso:277176. Chr.9: Asso:277177. Chr.12: Asso:277178. Chr.13: Asso:277179. Chr.14: Asso:277180, Asso:277181. QTL for Average lactate reported for chromosome(s): Chr.5: Asso:277182, Asso:277183. Chr.7: Asso:277184, Asso:277185. Chr.9: Asso:277186. Chr.11: Asso:277187. Chr.12: Asso:277188. Chr.16: Asso:277189. Chr.18: Asso:277190. QTL for Average glycolytic potential reported for chromosome(s): Chr.5: Asso:277191. Chr.7: Asso:277192, Asso:277193. Chr.12: Asso:277194. Chr.16: Asso:277195. QTL/association Reported by chromosomes: Chr.1 (1), Chr.5 (3), Chr.6 (1), Chr.7 (9), Chr.8 (1), Chr.9 (2), Chr.11 (1), Chr.12 (3), Chr.13 (1), Chr.14 (3), Chr.15 (1), Chr.16 (3), Chr.17 (1), Chr.18 (1). Pleiotropic QTL found: 7_rs318410870, on Chr.7 : 3 QTL; involving 3 traits in 0 breeds. 16_rs318442172, on Chr.16 : 3 QTL; involving 3 traits in 0 breeds. 5_rs697205060, on Chr.5 : 2 QTL; involving 2 traits in 0 breeds. 12_rs345106152, on Chr.12 : 2 QTL; involving 2 traits in 0 breeds. Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Xie X, Huang C, Huang Y, Zou X, Zhou R, Ai H, Huang L, Ma J (2023). Genetic architecture for skeletal muscle glycolytic potential in Chinese Erhualian pigs revealed by a genome-wide association study using 1.4M SNP array. Frontiers in Genetics, 14: 1141411; Curated into QTLdb on 2023-05-05. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=FaLu2P2AtJ

Xie X, Huang C, Huang Y, Zou X, Zhou R, Ai H, Huang L, Ma J (2023). Genetic architecture for skeletal muscle glycolytic potential in Chinese Erhualian pigs revealed by a genome-wide association study using 1.4M SNP array. Frontiers in Genetics, 14: 1141411; DOI: https://dx.doi.org/10.3389/fgene.2023.1141411

Publication # 37007966 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Pleiotropic QTL found:

Number of gene-based eQTL/associations: