| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 136.78 (cM) |
| QTL Span: | 135.92-137.65 (cM)
251.1-254.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs81234709 |
| Peak: | rs81234709 |
| Lower, "Significant": | rs80783314 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 2.69E-4 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc pigs from two independent populations.
Animal breed (IDs) involved: |
| Breeds associated:
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| Design: | Animals were genotyped using the PorcineSNP60 v2 BeadChip and analyzed to identify signatures of selection associated with IMF. A genome-wide association analysis was also performed, using a total of 41,012 SNPs. |
| Analysis: | A generalized linear mixed model was used. |
| Software: | PLINK, Beagle, R software |
| Notes: | **Due to small sample size, some people may consider the identified regions as only suggestive. |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kim ES, Ros-Freixedes R, Pena RN, Baas TJ, Estany J, Rothschild MF |
| Affiliation: | Department of Animal Science, Iowa State University, Ames, Iowa, USA |
| Title: | Identification of signatures of selection for intramuscular fat and backfat thickness in two Duroc populations |
| Journal: | Journal of animal science, 2015, 93(7): 3292-302 |
| Links: |
PubMed | Abstract | List all data
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