Release 56
(Apr 24, 2025)

QTL 126629 Description:

 Trait Information
Trait name: Teat number Vertebrate Trait Ontology: Nipple quantity
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: TNUM Clinical Measurement Ontology: Teat number
 QTL Map Information
Chromosome:X
QTL Peak Location:445.03 (cM)
QTL Span:443.05-447.02 (cM)
107.8-108.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs80794059
Peak:rs81256270
Lower, "Significant":rs80972182
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
VARIANCE0.69
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Pigs were from a 1/2 Landrace - 1/4 Duroc - 1/4 Yorkshire composite population.
     Breeds associated:
    Design:Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for teat number traits. A total of 41,148 SNPs were used for analysis.
    Analysis:BayesC methodology was used.
    Software:GENSEL, WOMBAT
    Notes: 
    Links:Edit

     Reference
    Authors:Rohrer Gary A, Nonneman Dan J
    Affiliation:U.S. Meat Animal Research Center, USDA, Agricultural Research Service, Clay Center, NE, USA
    Title:Genetic analysis of teat number in pigs reveals some developmental pathways independent of vertebra number and several loci which only affect a specific side
    Journal:Genetics, Selection, Evolution : GSE, 2017, 49(1): 4
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #28093083
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  • Cite this Data:

    Animal QTLdb: QTL126629 was published in 2017, and was curated into QTLdb on 2017-03-31. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:126629

     

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