| QTL Map Information |
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| Chromosome: | 3 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
0.8-0.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.80E-7 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| (none) |
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| QTL Experiment in Brief |
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| Animals: | The heterogeneous stock was derived from eight pig breeds consisting of 4 western commercial pig breeds (including Duroc, Landrace, Large White and Pietrain) and 4 Chinese local breeds (including Erhualian, Laiwu, Bamaxiang and Tibetan). |
| Breeds associated:
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| Design: | Whole-genome sequences were used in a genome-wide association study for meat quality and sensory panel traits. A total of 23,509,300 SNPs were used for analysis. |
| Analysis: | The Genome-wide Efficient Mixed Model Association (GEMMA) approach was used. |
| Software: | PLINK, R software, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ji J, Zhou L, Huang Y, Zheng M, Liu X, Zhang Y, Huang C, Peng S, Zeng Q, Zhong L, Yang B, Li W, Xiao S, Ma J, Huang L |
| Affiliation: | State Key Laboratory for Swine Genetics, Breeding and Production Technology, Jiangxi Agricultural University, Nanchang 330045, China |
| Title: | A whole-genome sequence based association study on pork eating quality traits and cooking loss in a specially designed heterogeneous F6 pig population |
| Journal: | Meat science, 2018, 146: 160-167 |
| Links: |
PubMed | Abstract | List all data
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