Release 56
(Apr 24, 2025)

QTL 180412 Description:

 Trait Information
Trait name: Facial morphology Vertebrate Trait Ontology: Facial morphology trait
Reported name: facial wrinkles Product Trait Ontology: n/a
Symbol: FAMORPH Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:7
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
30.2-30.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs80983858
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values4.45E-13
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Erhualian pigs.
     Breeds associated:
    Design:Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for extent of facial wrinkles. A total of 35,977 SNPs were used for analysis.
    Analysis:A generalized linear mixed model was used.
    Software:PLINK, GenABEL in R
    Notes: 
    Links:Edit

     Reference
    Authors:Huang T, Zhang M, Yan G, Huang X, Chen H, Zhou L, Deng W, Zhang Z, Qiu H, Ai H, Huang L
    Affiliation:State Key Laboratory of Pig Genetic Improvement and Production Technology, Jiangxi Agricultural University, Nanchang, P.R. China
    Title:Genome-wide association and evolutionary analyses reveal the formation of swine facial wrinkles in Chinese Erhualian pigs
    Journal:Aging, 2019, 11(13): 4672-4687
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:facial wrinkles
    User inputs on reference #31306098
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  • Cite this Data:

    Animal QTLdb: QTL180412 was published in 2019, and was curated into QTLdb on 2019-10-25. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:180412

     

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