Release 56
(Apr 24, 2025)

QTL 180969 Description:

Gene Information This is an eQTL
Gene name: tenascin C
Gene symbol: TNC
 QTL Map Information
Chromosome:13
QTL Peak Location:n/a
QTL Span:n/a
Upper, "Suggestive":n/a
Upper, "Significant":SW398
Peak:
Lower, "Significant":S0289
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:eQTL
Model tested:n/a
Test base:Chromosome-wise
Threshold significance level:Significant
F_Stat5.77
VARIANCE3.10%
P_values<0.05
Dominance effect:-0.80
Additive effect:-0.11
Associated Gene:TNC (tenascin C)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Pigs were from a reciprocal cross between Duroc and Pietrain and a commercial Pietrain population.
     Breeds associated:
    Design:Animals were genotyped for three SNPs in TNC and analyzed for meat and carcass quality traits.
    Analysis:ANOVA using the linear model procedure was performed.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Kayan A, Cinar MU, Uddin MJ, Phatsara C, Wimmers K, Ponsuksili S, Tesfaye D, Looft C, Juengst H, Tholen E, Schellander K
    Affiliation:Institute of Animal Science, Animal Breeding and Husbandry Group, University of Bonn, 53115 Bonn, Germany
    Title:Polymorphism and expression of the porcine Tenascin C gene associated with meat and carcass quality.
    Journal:Meat science, 2011, 89(1):76-83
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #21530096
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  • Cite this Data:

    Animal QTLdb: QTL180969 was published in 2011, and was curated into QTLdb on 2019-11-25. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:180969

     

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