| QTL Map Information |
|---|
| Chromosome: | 15 |
| QTL Peak Location: | 128.99 (cM) |
| QTL Span: | 128.99-128.99 (cM)
128.5-128.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs710828762 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | 0.01491 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #193168
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were German Landrace pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped by sequencing and analyzed for porcine pleuropneumonia phenotypes. |
| Analysis: | GWAS was performed using Fisher's exact test. |
| Software: | Beagle 4.1, PLINK, Haploview, SPSS |
| Notes: | At the time of curation, "rs" IDs were not available for many of the identified SNPs; these data were not entered. |
| Links: | Edit |
| Reference |
|---|
| Authors: | Nietfeld F, Höltig D, Willems H, Valentin-Weigand P, Wurmser C, Waldmann KH, Fries R, Reiner G |
| Affiliation: | Department for Veterinary Clinical Sciences, Justus-Liebig-University, Giessen, Germany |
| Title: | Candidate genes and gene markers for the resistance to porcine pleuropneumonia |
| Journal: | Mammalian genome : official journal of the International Mammalian Genome Society, 2020, 31(1-2):54-67 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #31960078
Add your comments
Note similar findings
Note contradictions
|
