| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 5.83 (cM) |
| QTL Span: | 5.66-6.00 (cM)
8.3-8.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs80867674 |
| Peak: | rs80916931 |
| Lower, "Significant": | rs709034557 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 2.26% | | P_values | 5.59E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from either a terminal Duroc nucleus purebred population or a commercial crossbred population sired by the same Duroc boars from a terminal line. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for back fat, loin depth, and ADG. A total of 36,328 SNPs were used for analysis. |
| Analysis: | GWAS was performed using the single-step genomic BLUP approach. |
| Software: | POSTGSF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Bergamaschi M, Maltecca C, Fix J, Schwab C, Tiezzi F |
| Affiliation: | Department of Animal Science, North Carolina State University, Raleigh, NC |
| Title: | Genome-wide association study for carcass quality traits and growth in purebred and crossbred pigs |
| Journal: | Journal of animal science, 2020, 98(1) |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | purebred |
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