Release 56
(Apr 24, 2025)

QTL 194830 Description:

 Trait Information
Trait name: PRRSV antibody titer Vertebrate Trait Ontology: Blood immunoglobulin amount
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: PRRSVAB Clinical Measurement Ontology: Antibody titer
 QTL Map Information
Chromosome:17
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
0.9-0.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs335100185
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:n/a
Threshold significance level:Significant
VARIANCE0.68%
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Pigs represented two genetic lines: a Large White-Landrace composite line selected for increased litter size, and an HD commercial cross selected for lean growth.
     Breeds associated:
    Design:Pigs were challenged with PRRSV prior to GWAS for susceptibility traits. Animals were genotyped using the Illumina PorcineSNP60 BeadChip, and a total of 57,390 SNPs were used for analysis.
    Analysis:GWAS was performed for PRRSV viremia, viral load, antibody level, and ADG using a BayesB model.
    Software:GenSel
    Notes: 
    Links:Edit

     Reference
    Authors:Walker LR, Jobman EE, Sutton KM, Wittler J, Johnson RK, Ciobanu DC
    Affiliation:Animal Science Department, University of Nebraska, Lincoln, NE
    Title:Genome-wide association analysis for porcine reproductive and respiratory syndrome virus susceptibility traits in two genetic populations of pigs
    Journal:Journal of animal science, 2019, 97(8): 3253-3261
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:in serum
    User inputs on reference #31150538
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  • Cite this Data:

    Animal QTLdb: QTL194830 was published in 2019, and was curated into QTLdb on 2020-04-30. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:194830

     

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