| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 46.07 (cM) |
| QTL Span: | 46.07-46.07 (cM)
33.1-33.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80937781 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 5.45E-8 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for growth and fatness traits. For GWAS, 45090 SNPs were used. |
| Analysis: | A linear mixed model was used. |
| Software: | |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Okumura N, Matsumoto T, Hayashi T, Hirose K, Fukawa K, Itou T, Uenishi H, Mikawa S, Awata T |
| Affiliation: | JATAFF-Institute, Japan Association for Techno-Inovation of Agriculture, Forestry and Fisheries, 446-1 Ippaizuka, Kamiyokoba, Tsukuba, Ibaraki 305-0854, Japan. |
| Title: | Genomic regions affecting backfat thickness and cannon bone circumference identified by genome-wide association study in a Duroc pig population. |
| Journal: | Animal genetics, 2013, 44 (4): 454-7 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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