| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
83.1-83.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80975591 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | - |
| Threshold significance level: | Suggestive |
 |
P_values | 0.0987 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Pigs were from a UNL resource population (gilts with either Large White x Landrace crossbred or Nebraska Index Line dams and sires from commercial Landrace lines) and two commercial populations (pure Landrace and Yorkshire or Landrace x Large White F1 crossbreds). |
| Breeds associated:
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| Design: | Animals were genotyped using either the Illumina PorcineSNP60 BeadChip or the SowPro90, a custom Affymetrix array enriched with candidate genetic variants for age at puberty. GWAS was performed for fertility traits. |
| Analysis: | A general linear mixed model and a haplotype-based BayesIM mixture model were used. |
| Software: | Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wijesena HR, Kachman SD, Lents CA, Riethoven JJ, Trenhaile-Grannemann MD, Safranski TJ, Spangler ML, Ciobanu DC |
| Affiliation: | Department of Animal Science, University of Nebraska-Lincoln, Lincoln, NE |
| Title: | Fine mapping genetic variants associated with age at puberty and sow fertility using SowPro90 genotyping array |
| Journal: | Journal of animal science, 2021, 98(10) |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | commercial population |
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