| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
138.1-138.1 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs329846969 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.20E-08 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were 2777 Duroc, Landrace, and Yorkshire pigs from seven farms of one large-scale breeding company. |
| Breeds associated:
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| Design: | Pigs were genotyped using the Illumina Porcine GeneSeek 50 K BeadChip, and GWAS was performed for umbilical hernia. A total of 48,528 SNPs were used for analysis. |
| Analysis: | Association tests were performed using the fixed and random model circulating probability unification (FarmCPU) model. |
| Software: | PLINK, Beagle 5.0, HIBLUP, RMVP |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Yang H, Wang L, Yin L, Tang Z, Wang Z, Liu X, Xiang T, Yu M, Liu X, Li C |
| Affiliation: | Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, Ministry of Education and College of Animal Science and Technology, Huazhong Agricultural University, Wuhan, China |
| Title: | Searching for new signals for susceptibility to umbilical hernia through genome-wide association analysis in three pig breeds |
| Journal: | Animal Genetics, 2023, 54(6):798-802 |
| Links: |
PubMed | Abstract | List all data
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