Release 56
(Apr 24, 2025)

QTL 289445 Description:

 Trait Information
Trait name: Sperm motility Vertebrate Trait Ontology: Sperm motility trait
Trait details: motile sperm after heat resistance test (38 deg C) Product Trait Ontology: n/a
Symbol: SPMOT Clinical Measurement Ontology: Motile sperm count to total sperm count ratio
 QTL Map Information
Chromosome:7
QTL Peak Location:n/a
QTL Span:n/a
20.1-20.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs81397457
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:Comparison-wise
Threshold significance level:Significant
P_values4.69E-5
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Pietrain boars.
     Breeds associated:
    Design:Animals were genotyped using the Illumina PorcineSNP60 BeadChip, and GWAS were performed for semen quality traits. A total of 40,820 SNPs were used for analysis.
    Analysis:A linear mixed model was used.
    Software:RepeatABEL in R
    Notes: 
    Links:Edit

     Reference
    Authors:Reyer H, Abou-Soliman I, Schulze M, Henne H, Reinsch N, Schoen J, Wimmers K
    Affiliation:Research Institute for Farm Animal Biology (FBN), 18196 Dummerstorf, Germany
    Title:Genome-Wide Association Analysis of Semen Characteristics in PiƩtrain Boars
    Journal:Genes, 2024, 15(3):382
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #38540441
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  • Cite this Data:

    Animal QTLdb: QTL289445 was published in 2024, and was curated into QTLdb on 2024-04-19. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:289445

     

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