Release 56
(Apr 24, 2025)

QTL 296158 Description:

 Trait Information
Trait name: Meat color Vertebrate Trait Ontology: n/a
Trait details: meat color (b*) Product Trait Ontology: Meat color
Symbol: MCOL Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:n/a
QTL Span:n/a
63.4-63.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs321052420
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:-
Test base:Experiment-wise
Threshold significance level:Suggestive
VARIANCE4.28%
FDR<0.1
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were purebred Yorkshire pigs.
     Breeds associated:
    Design:Pigs were genotyped using the Axiom Porcine Breeders array, and GWAS were performed for meat quality traits. A total of 45,926 SNPs were used for analysis.
    Analysis:A linear model was used.
    Software:Minitab, PLINK v1.9
    Notes: 
    Links:Edit

     Reference
    Authors:Lee JB, Lim JH, Park HB
    Affiliation:Korea Zoonosis Research Institute (KoZRI), Jeonbuk National University, Iksan 54531, Korea
    Title:Genome-wide association studies to identify quantitative trait loci and positional candidate genes affecting meat quality-related traits in pigs
    Journal:Journal of animal science and technology, 2023, 65(6): 1194-1204
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #38616878
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  • Cite this Data:

    Animal QTLdb: QTL296158 was published in 2023, and was curated into QTLdb on 2024-05-16. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:296158

     

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