| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
30.4-30.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81356882 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Yorkshire pigs in Korea. |
| Breeds associated:
|
| Design: | Animals were genotyped using either the Illumina 60K v1 or v2 BeadChip, and GWAS were performed for production traits. A total of 29,732 SNPs were used for analysis. |
| Analysis: | Single-step genomic best linear unbiased prediction (ssGBLUP) was used. |
| Software: | Shapeit4, PLINK v1.90, Impute5, BLUPF90, R software, CMplot, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Park J |
| Affiliation: | Department of Animal Biotechnology, Jeonbuk National University, Jeonju 54896, Korea |
| Title: | Genome-wide association study to reveal new candidate genes using single-step approaches for productive traits of Yorkshire pig in Korea |
| Journal: | Animal bioscience, 2024, 37(3): 451-460 |
| Links: |
PubMed | Abstract | List all data
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