| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 57.0 (cM) |
| QTL Span: | 40.09-40.10 (cM)
27.7-27.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 19.02 | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | LDLR (low density lipoprotein receptor) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from three pig populations: White Duroc x Erhualian F2, Sutai, and Duroc x Landrace x Large White. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and/or for two SNPs in LDLR and analyzed for serum LDL and total cholesterol levels. |
| Analysis: | A linear mixed model was used. |
| Software: | Haploview, Glascow, SAS, R software, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zeng Z, Chen R, Liu C, Yang H, Chen C, Huang L |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, Nanchang, 330045, China |
| Title: | Evaluation of the causality of the low-density lipoprotein receptor gene (LDLR) for serum lipids in pigs |
| Journal: | Animal genetics, 2014, 45(5): 665-73 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | LDLR:c.1812C>T |
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