Release 56
(Apr 24, 2025)

QTL 31349 Description:

 Trait Information
Trait name: Cholesterol level Vertebrate Trait Ontology: Blood cholesterol amount
Reported name: Cholesterol level Product Trait Ontology: n/a
Symbol: CHOLS Clinical Measurement Ontology: Blood total cholesterol level
 QTL Map Information
Chromosome:4
QTL Peak Location:46.8 (cM)
QTL Span:23.94-23.99 (cM)
12.7-12.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
PostProbInc0.932
Dominance effect:n/a
Additive effect:n/a
Associated Gene:DECR1 (2,4-dienoyl CoA reductase 1, mitochondrial)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Duroc pigs.
     Breeds associated:
    Design:Animals were genotyped for two SNPs in DECR1 and one SNP in ME1 and analyzed for serum lipids and intramuscular fat content.
    Analysis:A Bayesian method was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Ramírez O, Quintanilla R, Varona L, Gallardo D, Díaz I, Pena R N, Amills M
    Affiliation:Departament de Cičncia Animal i dels Aliments, Facultat de Veterinŕria, Universitat Autňnoma de Barcelona, Bellaterra, Spain
    Title:DECR1 and ME1 genotypes are associated with lipid composition traits in Duroc pigs
    Journal:Journal of animal breeding and genetics , 2014, 131(1): 46-52
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #25099788
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  • Cite this Data:

    Animal QTLdb: QTL31349 was published in 2014, and was curated into QTLdb on 2014-11-06. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:31349

     

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