| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | 24.17 (cM) |
| QTL Span: | 24.17-24.17 (cM)
24.6-24.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80801708 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 10.7 | | P_values | 1.36E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Laiwu pigs. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for meat quality traits. A total of 49,452 SNPs were used for analysis. |
| Analysis: | A generalized linear mixed model was used. |
| Software: | PLINK, GenABEL, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Xiong X, Liu X, Zhou L, Yang J, Yang B, Ma H, Xie X, Huang Y, Fang S, Xiao S, Ren J, Chen C, Ma J, Huang L |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, Nanchang, 330045, China |
| Title: | Genome-wide association analysis reveals genetic loci and candidate genes for meat quality traits in Chinese Laiwu pigs |
| Journal: | Mammalian genome, 2015, 26(3-4): 181-90 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Longissimus muscle |
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