Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 6321 Description:

 Trait Information
Trait name: Blood pH Vertebrate Trait Ontology: Blood pH regulation trait
Reported name: Blood pH Product Trait Ontology: n/a
Symbol: BLPH Clinical Measurement Ontology: Blood pH
 QTL Map Information
Chromosome:X
QTL Peak Location:379.26 (cM)
QTL Span:74.4-101.9 (cM)
86.8-125.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":S0117
Peak:
Lower, "Significant":SW1608
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
F_Stat6.04
VARIANCE10.16
P_values<0.05
Dominance effect:0.22
Additive effect:-0.02
Associated Gene:Ifng (interferon gamma)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #6321
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were a Pietrain x Meishan cross.
     Breeds associated:
    Design:Animals were genotyped for 101 microsatellite markers and anayzed for blood gases and pH at various stages of infection with the protozoan parasite Sarcocystis miescheriana.
    Analysis:Least-squares regression mapping was used.
    Software:SPSS, REML VCE, QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:Reiner, G; Fischer, R; Kohler, F; Berge, T; Hepp, S; Willems, H
    Affiliation:Department of Veterinary Clinical Sciences, University of Giessen, D-35392 Giessen, Germany
    Title:Heritabilities and quantitative trait loci for blood gases and blood pH in swine.
    Journal:Animal genetics, 2008, 40 (2): 142-8
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:14 days post-challenge with protozoan parasite Sarcocystis miescheriana
    User inputs on reference #19076735
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL6321 was published in 2008, and was curated into QTLdb on 2009-07-24. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:6321

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team