| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 118.58 (cM) |
| QTL Span: | 118.58-118.58 (cM)
91.6-91.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80965843 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 2.6 | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from five different pig populations: 1) White Duroc x Erhualian F2; 2) Sutai; 3) Laiwu; 4) Erhualian; and 5) commercial crossbred population of Duroc x Large White x Yorkshire (DLY). |
| Breeds associated:
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| Design: | Animals were genotyped using the PorcineSNP60 BeadChip and analyzed for organ weight traits. |
| Analysis: | A generalized linear mixed model was used. Populations were analyzed individually, then a meta-analysis was performed using data from all populations. |
| Software: | PLINK, GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | He Y, Li X, Zhang F, Su Y, Hou L, Chen H, Zhang Z, Huang L |
| Affiliation: | National Key Laboratory for Swine Genetics, Breeding and Production Technology, Jiangxi Agricultural University, Nanchang, 330045, China |
| Title: | Multi-breed genome-wide association study reveals novel loci associated with the weight of internal organs |
| Journal: | Genetics, Selection, Evolution : GSE, 2015, 47: 87 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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